Bioinformatics & Genomics

May 15, 2023

Accelerate Whole Exome Analysis with Deep Learning at 70% Cost Reduction Using NVIDIA Parabricks

The human exome is key to understanding and treating genetic disorders and disease. Although the exome consists of just over 1% of the human genome, it also...

9 MIN READ

Apr 14, 2023

A Guide to CUDA Graphs in GROMACS 2023

GPUs continue to get faster with each new generation, and it is often the case that each activity on the GPU (such as a kernel or memory copy) completes very...

13 MIN READ

Mar 21, 2023

Long-Read Sequencing Workflows and Higher Throughputs in NVIDIA Parabricks 4.1

The upcoming 4.1 release of NVIDIA Parabricks, a suite of accelerated genomic analysis applications, goes further than ever before in accelerating sequencing...

6 MIN READ

Jan 12, 2023

Genomic LLMs Show Superior Performance and Generalization Across Diverse Tasks

A collaboration between InstaDeep, the Technical University of Munich (TUM), and NVIDIA has led to the development of multiple super-computing scale foundation...

4 MIN READ

Nov 03, 2022

New Research Highlights Speed and Cost Savings of NVIDIA Clara Parabricks for Genomic Analyses

Many organizations are using NVIDIA Clara Parabricks for fast human genome and exome analysis for large population projects, critically ill patients, clinical...

9 MIN READ

Oct 19, 2022

Achieving 100x Faster Single-Cell Modality Prediction with NVIDIA RAPIDS cuML

Single-cell measurement technologies have advanced rapidly, revolutionizing the life sciences. We have scaled from measuring dozens to millions of cells and...

8 MIN READ

Sep 21, 2022

Democratizing and Accelerating Genome Sequencing Analysis with NVIDIA Clara Parabricks v4.0

The field of computational biology relies on bioinformatics tools that are fast, accurate, and easy to use. As next-generation sequencing (NGS) is becoming...

8 MIN READ

Jun 06, 2022

Scale Cancer Genome Sequencing Analysis and Variant Annotation Using NVIDIA Clara Parabricks 3.8

Bioinformaticians are constantly looking for new tools that simplify and enhance genomic analysis pipelines. With over 60 tools, NVIDIA Clara Parabricks powers...

4 MIN READ

Mar 22, 2022

Boosting Ultrarapid Nanopore Sequencing Analysis on NVIDIA DGX A100

Fast and cost-effective whole genome sequencing and analysis can bring answers quickly to critically ill patients suffering from rare or undiagnosed...

7 MIN READ

Accelerate drug discovery with NVIDIA Clara

Mar 10, 2022

AI and Drug Discovery Q&A: NVIDIA Genomics with Johnny Israeli

The following post provides a deep dive into some of the accomplishments and current focus of drug discovery and genomics work by NVIDIA. A leader in...

12 MIN READ

Feb 22, 2022

Expanding Accelerated Genomic Analysis to RNA, Gene Panels, and Annotation

The release of NVIDIA Clara Parabricks v3.6 last summer added multiple accelerated somatic variant callers and novel tools for annotation and quality control of...

5 MIN READ

Jan 18, 2022

Clara Parabricks 3.7 Brings Optimized and Accelerated Workflows for Gene Panels

The newest release of GPU-powered NVIDIA Clara Parabricks v3.7 includes updates to germline variant callers, enhanced support for RNA-Seq pipelines, and...

7 MIN READ

Sep 08, 2021

Analyzing the RNA-Sequence of 1.3M Mouse Brain Cells with RAPIDS on NVIDIA GPUs

Single-cell genomics research continues to advance drug discovery for disease prevention. For example, it has been pivotal in developing treatments for the...

8 MIN READ

Aug 24, 2021

GPU-Accelerated Tools Added to NVIDIA Clara Parabricks v3.6 for Cancer and Germline Analyses

The release of NVIDIA Clara Parabricks v3.6 brings new applications for variant calling, annotation, filtering, and quality control to its suite of powerful...

5 MIN READ

Jun 04, 2021

Healthcare - Top Resources from GTC 21

Here are the latest resources and news for healthcare developers from GTC 21, including demos and specialized sessions for building AI in drug discovery,...

3 MIN READ

Mar 03, 2021

The Human Genome Center at University of Tokyo Adopts NVIDIA Clara Parabricks for Rapid Genomic Analysis

The Human Genome Center (HGC) at University of Tokyo announced a new genomics platform to accelerate genomic analysis by 40X compared to a CPU-based...

5 MIN READ